Walter Versus the Cottonmouth

Run in Peace, Dear Boy

Run in Peace, Dear Boy

We had to put our dear dog, Walter, down today.  He was too young – perhaps 8 or so.  We don’t know his age because he came wandering into our yard one day in 2005.  We found out who his owners were and tried to contact them.  They never returned our calls.  So Walter sewed himself into the quilt of our lives.  This dog was a pain in the butt – like a prisoner hell bent on escape.  Each time he fled, some nice person always called us and we got him back.  One day not too long ago, he stopped running out of our yard…that was nice but sad at the same time.

Last weekend, Walter came home and didn’t seem himself.  It was obvious that he got in a fight with something – blood was running out of his mouth.  We shrugged it off until the next morning, when he was still slobbering crimson.  We sought medical assistance.  The vet was confused.  The wounds in his mouth were unusual – two punctures.  His tonsils were slightly swollen.  Blood work showed that his clotting factor and platelet counts had plummeted.  The vet was lost.  These two issues don’t usually happen at the same time.  One symptom suggested rat poison; the other a bad infection.

The vet sent us home with about $400 worth of medication to deal with both problems and we treated him diligently.  But he just declined.  I took him back to the vet yesterday and the prognosis was splenic cancer.  The spleen is blood-cell central.  So, that made sense.  We prepared ourselves for the inevitable.

Last night, I had a revelation.  Walter loved water.  In fact, the day he started bleeding, he had shown up earlier in the afternoon soaked from dipping in a pond or stream.  It occurred to me that perhaps the real culprit wasn’t Walter’s spleen.  Two punctures in the mouth.  Uncontrolled bleeding plus confusing blood work.  Sounded like a snake bite to me.  Pit vipers like cottonmouths are common around here.  It has been an unusually wet spring.  I’d bet they were out on the day he was taking a dip.  Their venom is a potent hemorrhagic, causing platelet counts to drop and blood clotting factor to vanish.  That’s how they kill their prey – they make them bleed out.

There’s more.  Walter did not like snakes.  His life was punctuated with battles with black rat snakes in the yard.  He’d bark, bite, and lunge until each snake escaped into the brush or I rescued it.

Did Walter have a near fatal battle with a cottonmouth that day?

Back to the tragedy that is today.  When we brought him in this morning to send him to that great dog run in the sky (actually we think he’s sitting on the hill in our yard eyeing the deers), I mentioned to the vet, who saw the puncture wounds and puzzled over the weird blood work, that Walter may have been done in by a snake.  I will never forget the look I got from the vet – confusion and perhaps a touch of pity.  She was thinking:  Here was someone with no ability to process what was happening, grasping at twigs.  Rather than a routine splenic condition, I had warped it into an epic battle between Walter and a rather nasty venomous water snake.

Am I nuts?

I get paid to think creatively about science.  The vet gets paid to thumb through a set of known symptoms and use that to guide the treatment.  Deviations from the recipe make things messy and perhaps a bit scary.  After the deed was done and my poor dog breathed his last, I wondered whether the vet might take a look under the hood – just to see what happened to him.  I offered to allow her to do a necropsy…for science’s sake.

There was no interest in doing that – unless I wanted to pay another fee.

Quite frankly, I doubt that the vet would know what she was looking at and even if she did, there really was no sense in it.  Walter was gone and I know, I am sure, I am convinced that he kicked that snake’s butt.  Good boy.

 

Crowdfunding Spoonbills

Paddlefish crying for help.

Paddlefish crying for help.

Would you donate $5 to save this species?

The North American paddlefish (or spoonbill catfish) is an icon of American rivers.  Its closest relative is the Chinese paddlefish, which likely blinked out of the world in the past two decades.  Extinction is not reversible.

I have done some research on this species.  Finding research funding for it is particularly difficult.  State and federal agencies would like to pour resources into research – but funds are limited.  The only real ways to get money to study a fish species like paddlefish is if (1) it is recreationally or commercially important, (2) it is going extinct, or (3) it threatens to invade an economically important ecosystem.  At this juncture, I can only worry because the data are too limited for action.  This is not bitterness or cynicism.  Just fact in our world.

No wonder this poor fish looks like it’s crying.

A recent phenomenon for raising money for important causes is web-based crowdfunding, like Kick Starter.  The paddlefish is a poster-child for raising awareness and perhaps money through mechanisms like this.

The paddlefish is commercially valuable (spoonbill caviar is an expensive delicacy), although management of fishing for it is piecemeal at best here in the US.  This is not the fault of anyone…but fishing is likely going to take its toll on the viability of this species.   Paddlefish are highly migratory.  Dams, habitat alteration, and barge navigation all likely have negative impacts on the species.

So what can we do to help it?

Gain knowledge about how to better inform policy makers.  Knowledge, in this case, is power.  My research group has some limited data on the population dynamics and genetic viability of the species.  Honestly, there are no ways to get government money to gain a comprehensive picture and push policy makers to keep the disaster of the Chinese paddlefish from happening here.  So, I suggest crowdfunding.

paddlefish2

Here’s my question.  I’m a reputable researcher with a proven track record.  Would you fund my research group to help this species?  Comments would be welcome.  I mean, if you are willing to do it to bring Veronica Mars back, would you do it to save a species?  Give me a like if you would and pass the word on.  If things look good, I’ll start passing around the net, I mean, hat.

Am I Relevant? We All Have Stats.

Citations through the years.

Citations through the years.

If you obsessively check your internet statistics, this one’s for you.

Any of us publishing scientists should recognize the type of chart pictured here.  It is generated by a tool called Web of Science, which in the ancient times was called the Science Citation Index.  What this tool is meant to do is to let us see what papers have cited a paper we are reading.  Follow?

Imagine any scientific paper as a link in a chain.  The paper is supposed to cite all the research papers that “generated” the information in that paper.  Theoretically, you can go to the reference section of that paper, then to the reference section of any of those cited papers, and then to the referenced papers in those papers, ALL THE WAY BACK to the “source”.  The source is the fountain, the citation classic, the place from which the idea originated.  Pretty cool and very powerful for science.  You can see a scientific concept develop from a mere hypothesis to a full-grown field of study.

Do most of us scientists use the Web of Science  this way?  Heck no.  We use it to see who is citing the papers we wrote.

Take the chart for an anonymous scientist (me).  Not too bad, although the citations per year seem to have settled at about 120 per year.  This means that 120 journal articles are citing at least one of my scientific papers (sorry blog posts don’t count) each year.  That’s not bad, but I probably should be pushing that number up.  After all, I have colleagues who are getting 300-400 citations per year.  I suppose I should be writing another journal article rather than spending my time on this post.

Anyone who uses social media (including this blog tool) know that they provide stats.  You can count the number of friends, views, downloads, comments, likes, etc. that you generate when you lob something into the ether.  People dream of “going viral” because it means fame, short-lived as that may be and perhaps even some advertising dollars.  For some of us, it is merely addictive.  Welcome to the world I live in…the publish or perish one.  Actually, I wish it was that easy.  Now, it is the publish and get cited or perish world.

I know that some who might be reading this post see that apparent slide in my citations after 2010 as an indicator that good old Dr. Jim is slipping.  Maybe his stuff is not that relevant anymore.  Heck, even I think that.  However, I know that there are lots of alternative reasons for this decline and I also know that I have a lot more papers coming out soon.  So, really, for those who are wondering about my productivity – suck it.

Did you detect the hint of insecurity and defensiveness there?

Now, imagine turning that feeling on in billions of people worldwide who are logging into their account right now to see whether someone is paying attention to them.  My advice?

Stop obsessing, go outside, and talk to a real human being.  Let the scientists and movie stars worry about their reputations.